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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… plant species have adapted to their local environments; for example, crop and ornamental seeds sold for the upper … and are exploring improvements to switchgrass through more targeted genome editing techniques to customize the … find genetic regions of interest.” The combination of field data and genetic information has allowed the research team …
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Bayesian Analysis of Congruence of Core Genes in Prochlorococcus and Synechococcus and Implications on Horizontal Gene Transfer
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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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David Goodstein
… and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building … Dr. Goodstein currently leads the Plant Comparative Analysis group, and is responsible for genome annotation, comparative analysis and data distribution for the JGI's direct collaborators and the …
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Accelerating Metagenomics Discoveries with Deep Learning
… participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered … vector representations of proteins in order to conduct more efficient protein sequence alignments. He also aims to …
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Simon Roux
… link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts … of viral ecogenomics. For this role, Dr. Roux can rely on more than 10 years of expertise in the fields of virus …
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Ben Bowen
… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. Bowen’s expertise in spectral …
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Enlarging Windows into Understanding Gene Functions
… array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … (cDNA), reducing the amount of time it takes to produce a dataset from months to days and halving the total reagent … years ago that there is no shortage of fungal genomes anymore, but their functional interpretation is as tough as it …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … division of labor between the two groups. Fungi are much more active in degrading plant matter, and bacteria are more … Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein …
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