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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re … Institute, or JGI.  Two special days occur in April: the 50th celebration of Earth Day on April 22, and DNA Day on …
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Learning to Look
… more than 10,000 inovirus-like sequences compared to the 56 previously known inovirus genomes. “These genomes are so … approach detected inoviruses in 3,609 (6 percent) of the 56,868 microbial genomes and 2,249 of the 6,412 (35 percent) metagenomes mined for this study. “We’re simply …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… You’d go find the cash converter box, feed it a $1, $5 or $10 bill and receive a set amount of tokens, … increased efficiency, the model can process these tokens 150 times faster.  Leveraging Large Data Sets for Smarter AI … by JGI users. These datasets include an extensive 25-year study of microbial communities in freshwater …
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Building Sphagnum Genomic Resources
… matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, … the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment … the U.S. Department of Energy under Contract Number DE-AC05-00OR22725. Funding for the peatlands work was also …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… papers, including two Nature Plants publications, in five years, have come out of the JGI-supported project. “The JGI … of the DNA Synthesis Science Program by applying to the year-round Community Science Program Functional Genomics …
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UC Merced Interns Reflect on Their JGI Summer Projects
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Pinning Down a Piece of Photosynthesis
… list of genes, termed  The GreenCut2 Resource . It details 597 genes coding for proteins that are unique to …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… version of the genome is assembled into sequences of 5.5 million basepair (bp) in length, while the previous … set up these gardens, we have them to study for a number of years. And that’s a real benefit for the research program.” …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … of the physical memorabilia that she’s held onto over the years. The DOE brought together the people and resources … the DOE Joint Genome Institute in 1997. Over the next seven years, and in collaboration with researchers at the Stanford …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… this way was challenging, according to Martin. “Twelve years ago, when we mapped the first sequenced RNA from the … Fungal Genomes project changed that. This is a multi-year project in collaboration with the JGI to sequence 1000 … After starting with about 200 fungal genomes, in just a few years, he said, the 1000 Fungal Genomes project, together …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… M. polymorpha is also among one of the plants representing 35 major evolutionary plant lineages in the  Open Green … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) conducted by the US Department of Energy …
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What Happens Underground Influences Global Nutrient Cycles
… Institute (JGI)—have selected 11 proposals for support from 53 received through a joint research call. Submitted …
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