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In a special issue of mSystems , out May 14, 2019, JGI researchers are among the … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes … They are abundant representatives of deep subsurface ecosystems. A team of researchers described how the viruses … genomes include short DNA sequences that code for CRISPR systems, which help bacteria resist foreign genetic elements …

Brachypodium model system traces polyploid genome evolution. Flowering plants … National Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …

… and Ambrose Monell Foundations, the Natural Sciences and Engineering Research Council of Canada, the Canada …

… a unique chronic infection cycle. “We’re not sure why we systematically manage to miss them; maybe it’s due to the … small genomes can be easily manipulated through genetic engineering, inoviruses are used for several … with nearly all bacterial phyla across virtually every ecosystem.” By significantly expanding the known diversity of …

Structure and Methane Production in California’s Canal System,” she will work with Susannah Tringe, JGI’s User Programs deputy and head of the Microbial Systems group. Tringe’s research group focuses on the roles … develop the omics methodologies into workflows with the DOE Systems Biology Knowledgebase (KBase) , in collaboration …

… how these changes affect the dynamics and functioning of ecosystems. She leads a recently approved CSP New Investigator … Research Center. Her research focus is genetically engineering the plant cell wall to address dairy … His lab is interested in how microbial communities can efficiently degrade complex polymers that are not easy to …

… or not you planned it, viruses are most likely in your system and in your data, and they’re probably influencing … Group Lead at the JGI.  To understand the microbiome systems underpinning a broad range of environmental … invisible to the sampling experiments probing Earth’s ecosystems. Viruses rarely grow well in environmental samples …

… the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal contained biosynthetic …

… “Ensuring that the most expressed genes are also the most efficient at making proteins likely factors into why fungi … Wint said. “Fungi play an important role in the earth’s ecosystem,” said Salamov, one of Wint’s mentors and a data …

… company LanzaTech to develop a “cell-free” gene expression system. Developed through the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to test enzymatic pathways, which … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …