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… used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new … reflecting factors such as the quality and number of datasets for human microbiome data. In other environments, …

Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with Matt Blow; Sean …

… quality genome assemblies for all three grasses. With these datasets, researchers made a pan-genome containing four  B. … . … Brachypodium distachyon on Phytozome Data Portal …

Monell Foundation. … Ceratopteris richardii on Phytozome Data portal … Datasets …

… . … Phakopsora pachyrhizi on MycoCosm Data Portal …

… — mainly actinobacteria, as well as proteobacteria, bacteroidata, and patescibacteria. A major strength of this kind of … … Leotiomycetes and Coniochaeata lignaria on MycoCosm Data portal … Datasets …

… with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data with …

… is working on the display and visualization of large omics data. …

… of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and files in various formats. …

… metagenomes. He also works on automating intra-department data exchange and assists with large scale computations on …

… synthesis support, sequencing, integrative -omics, and data mining, empowering research collaborators to take on … screens for characterization of new enzymes and use the data we generated to train machine learning models now …