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… offering of sequencing capabilities and products to our users. This includes scaling the technologies and enabling … The JGI provides users access to cutting-edge cell sorting, DNA …

… them are actinobacteria. And so we get a lot of them from databases of organisms, so things like the NRL database - or online catalog, I guess. So we've also been … that makes it really challenging to actually interpret the data. And so we've been able to get these-- DAN: In terms of …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a computer could … a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to identify a … of phage-bacterial coevolution and are also useful tools in CRISPR-Cas applications, but we are limited in our …

… that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over … and … that was really the foundation for many of the tools that are available these days and that are widely used … actually tested in the 2011 paper. In 2015, the study’s dataset became material for a hands-on undergraduate …

… fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the …

… an array of experiments at universities and national user facilities, researchers found that this protein detects … or DRI for short.  A kaleidoscope of structure-function data To study DRI experimentally, Blaby-Haas, Grosjean and … function inside the cell, Grosjean used the JGI-developed  guideRNA and Sequence Extraction Tool (gRNA-SeqRET) to …

… has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So … in the way that they grow.  ALISON: Yeah. Okay, so that bubble is probably filled with secondary metabolites.  DAN: … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …

… them to adapt to life on land. Learning that these genetic tools existed in close algal relatives  to terrestrial … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … discovered that ancient algae already possessed genetic tools to cope with environmental stresses such as drought …

… to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … Populus across genotypes and environments. 2024 Nature Sci Data. 11, 339. https://doi.org/10.1038/s41597-024-03069-7  … 4;118(18). https://doi.org/10.1073/pnas.2019855118 McGivern BB et al. Decrypting bacterial polyphenol metabolism in an …

… DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase … and skill development while curating reusable microbiome data. Undergraduate educators are partnering with the JGI … in parallel. While KBase does not currently have all the tools for complete processing and analysis of fungal data, …