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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … Ocean long ago, this shift to archaea being the main producer doesn’t occur here. Understanding this fundamental … (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …
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Science Programs
… their expertise to enhance the scientific impact of user projects, develop cutting-edge approaches for and with users, and create computational tools and resources for them. Their concerted efforts help maximize the JGI’s impact in advancing …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint … Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: … designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Resequencing and annotation of the Nostoc punctiforme ATTC 29133 genome: facilitating biofuel and high-value chemical production
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Supporting Global Research into Actinomycetes
… word. The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … are also abundant in soil and can be used as biocontrol agents and to promote plant growth. It is the largest … resource. ) “Most people study actinomycetes because they produce a very wide variety of chemical compounds as …
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Game On: High School Students Drive Everglades Metagenomics Study
… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to … able to receive training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample …
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Emiley Eloe-Fadrosh
… ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to joining … ( magna cum laude ) PhD, Marine Biology, Scripps Institution of Oceanography …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c … the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , Yoshikuni and …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … has been no real analysis of protein families from metagenomes per se.”  Recently, other research teams have …
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Atif Shahab
… of an integrated platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines project management, laboratory information tracking, and enables efficient analysis and reporting of … Education …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories around the …
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