Results

Rapid changes in coastal ocean microbiomes uncoupled with shifts in environmental variables
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Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction
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Reference-free structural variant detection in microbiomes via long-read co-assembly graphs.
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Quantitative genetic-by-soil microbiome interactions in a perennial grass affect functional traits
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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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metagRoot: a comprehensive database of protein families associated with plant root microbiomes
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STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies
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SNP Assay Development for Linkage Map Construction, Anchoring Whole-Genome Sequence, and Other Genetic and Genomic Applications in Common Bean
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Expression quantitative trait loci mapping identified PtrXB38 as a key hub gene in adventitious root development in Populus
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An Automated Tool for Assessing Virus Data Quality
… virus sequences vary widely. In a previous effort, an international consortium recommended specific … assessment, host prediction, and phylogenetic analysis. The development of CheckV helps researchers to assess the … database that is part of the Integrated Microbial Genomes & Microbiomes (IMG/M) suite, as well as sequences from the …
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MGM Workshop at Fisabio Summer School 2026
… Register here for the workshop The MGM Workshop is Module 4 of the Fisabio … and seminars as well as practical hands-on sessions in bioinformatics and biostatistics. Several sessions will be … training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Rekha Seshadri and …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … that can help bioremediate toxic substances has led to the development of cost-effective environmental cleanup … to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since …
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