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Simon Roux
… of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus … link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of viral ecogenomics. For this role, Dr. …
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The Expanding Universe of Methane Metabolisms in Archaea
… of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. … involved in short-chain alkane oxidation. “We propose a scenario where methanogenesis is possibly the most ancient …
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Ultraconservation identifies a small subset of extremely constrained developmental enhancers
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Katherine Louie
… to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to … databases by running 1000s of metabolite standards, and development of high-throughput untargeted analysis …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… the Community Science Program’s  Functional Genomics call for proposals .  On July 8, JGI’s DNA Synthesis Science … the Community Science Program’s  Functional Genomics call for proposals . The proposal call is open year-round, but … driven his lab’s focus on guide RNA library generation and development and its applications. “I moved to UC Davis in …
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JGI Accepts 17 Proposals for Community Science Program
… on harnessing genomics to developing sustainable resources for biofuels and bioproducts. Andrew Nelson of the Boyce … genome sequence for Eucalyptus grandis. Accessing recently burned soils in California and Colorado, Mike Wilkins … State University and colleagues aim to understand how soil microbiomes in fire-adapted ecosystems respond to low and …
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An Automated Tool for Assessing Virus Data Quality
… virus sequences vary widely. In a previous effort, an international consortium recommended specific … assessment, host prediction, and phylogenetic analysis. The development of CheckV helps researchers to assess the … database that is part of the Integrated Microbial Genomes & Microbiomes (IMG/M) suite, as well as sequences from the …
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
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Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery
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Heterospecific Neighbor Plants Impact Root Microbiome Diversity and Molecular Function of Root Fungi
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The rhizosphere microbiome of burned holm-oak: potential role of the genus Arthrobacter in the recovery of burned soils
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