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Nitrogen and phosphorous acquisition strategies drive coexistence patterns among archaeal lineages in soil
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JGI@25: Using Team Science to Build Communities Around Data
… The 1KFG project represents affiliations at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: … Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early diverging fungi, and Francis … National Institute for Agricultural Research (INRAE) focused on in-depth exploration of ecology-related groups of …
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Boosting Small Molecule Production in Super “Soup”
… to keep processes running smoothly. As  reported August 26, 2021, in  Nature Communications , researchers led by … and so one of the things that I think is so special about this collaboration is that we’re doing work in yeast, … and that’s one of these things that we’re really excited about in the future, to see if that’s possible.” Alper and …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis grant during a presentation that … Prospective users are always welcome to contact one of us about possible proposals if it’s different from what is on …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted … the University of Minnesota is interested in learning more about the fungal endophytes of soybean and how they deter … this approach would also allow researchers to learn more about what is and is not modifiable in crops, which can help …
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Taking Stock of the Known and Unknown Microbial Space
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate … bacterial diversity. The team conservatively estimated that about 42% of the bacterial diversity has no genomic …
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Four Researchers Join JGI User Executive Committee
… Four researchers have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility located at Lawrence Berkeley National … UEC also contributes to proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who …
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Frederik Schulz
… leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs … biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… going forward. Watch this short video (below) to hear more about the summer from their own perspectives. The interns … JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and mentor Vy … in Photosynthesis Ravikiran Madichetty and mentors TBK Reddy and Dimitri Stamatis, Porting XML/Python Based Quality …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to … other words, some like it hot; some do not. “We can think about the ocean, naively, as a sort of homogeneous medium. … moderate waters that have an average surface temperature of about 58° Fahrenheit (14° Celsius) — a cool intermediate to …
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Enlarging Windows into Understanding Gene Functions
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … as tough as it has been 10 years ago,” he said. “We thought about reconstructing gene regulatory networks, understanding … team is comparing five fungal species to answer questions about how they break down plant materials, which could be …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel … miscellanea of their surroundings. Case in point: for us, the smell of the ocean simply signals we’re near the … contexts.  “That allows us now to really start thinking about the structure-function relationship. What could we do, …
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