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Building Sphagnum Genomic Resources
… resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel … decomposed matter, and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high … elevated concentrations of atmospheric carbon dioxide. Summary Sphagnum (peat moss) is an unassuming plant, but it …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… established and emerging scientists from academia, industry, and government organizations for three days of scientific presentation, … center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your …
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Taking Stock of the Known and Unknown Microbial Space
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate … they used five universally conserved, protein-coding marker genes on nearly 2 million genomes, including …
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Complete genome sequence of Halomicrobium mukohataei type strain (arg-2T)
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JGI@25: From Life at the Extremes to Editing Genomes
… ecosystems around the world, conducting iterative searches using statistical analyses to continuously refine and improve the process of finding novel Cas … and Management.” So begins a passage from Doudna’s book about her meeting with Banfield. (Banfield’s recounting of …
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JGI User Executive Committee Expands
… Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of … his fungal genetics expertise and experience as a primarily fungal genomics user, he aims to help align JGI … JGI offers, as well as proposal review procedures and the organization of the JGI Annual Meeting. Any investigator who …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… alga into a powerful platform for developing ​​bio-based industrial products.    The Science Scientists have fully … microbes for bioproducts and biomaterial manufacturing.  Summary Auxenochlorella UTEX 250-A provides an unprecedented … modifications usually insert randomly in other algae, this organism lets scientists place new genes precisely where …
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Better Living Through Bioenergy
… Pseudomonas putida to break down biomass and help bring about a more sustainable, biobased economy. They conduct research at the … Institute (JBEI) , a JGI partner and one of the four US Department of Energy Bioenergy Research Centers.  …
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Enlarging Windows into Understanding Gene Functions
… over and over in a dizzying array of combinations, are unremarkable, save perhaps for the absence of all the other … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … as tough as it has been 10 years ago,” he said. “We thought about reconstructing gene regulatory networks, understanding …
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Soybean (Glycine max) Haplotype Map (GmHapMap): a universal resource for soybean translational and functional genomics
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most … inform conservation efforts for at-risk populations. Summary Eelgrass is unique in that there are not many species … and by a grant to J. Eisen, J.J.S. and J.L.O. from the US Department of Energy Joint Genome Institute Community …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and … the world’s rivers and their microbial communities. He’s focusing on the Arkansas River and how microbes might be influencing its health.  He sat down with me to talk about his project, and riffed a bit on what it means in a …
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