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Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… to look at how this enzyme family evolved across 90 species. “One unique thing about this work was our focus on … kingdoms, including animals, plants, bacteria, archaea and fungi. We thought this kind of analysis would provide a … each of six kingdoms: eubacteria, archaea, protist, plant, fungi and animal. This analysis led them to identify 2,938 …
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Genomic characterization of three marine fungi, including Emericellopsis atlantica sp. nov. with signatures of a generalist lifestyle and marine biomass degradation
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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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Hyperdiverse, bioactive, and interaction-specific metabolites produced only in co-culture suggest diverse competitors may fuel secondary metabolism of xylarialean fungi.
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JGI@25: Solving the Mystery of the Missing Oil
… his team tracked the thousands of bacterial and archaeal species using a DNA-based array developed at Berkeley Lab. … expertise led to the identification of a new “oil-seeking” species related to Oceanospirillales , work that also involved Janet …
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JGI@25: Strengthening Soybean
… gasoline. Yet.  In 2010, soybean became the first legume species with a published complete draft genome sequence. At … positionally cloning genes involved in agronomic traits related to nutritional quality and disease resistance  due … to sequence — roughly 1.25 billion Gb (gigabasepairs — most fungi are around 50 million Mb, or megabases, in size). So, …
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The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota
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Microtopography Matters: Belowground CH4 Cycling Regulated by Differing Microbial Processes in Peatland Hummocks and Lawns
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Comparison between Ribosomal Assembly and Machine Learning Tools for Microbial Identification of Organisms with Different Characteristics
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Igor Grigoriev
… Lankiewicz et al (2023) Lignin deconstruction by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) … Res. 49(D1):D1004-D1011 Swift et al (2021) Anaerobic gut fungi are an untapped reservoir of natural products. Proc … et al (2020) Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of …
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Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza
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