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Respiratory processes of early-evolved hyperthermophiles in sulfidic and low-oxygen geothermal microbial communities
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Functional redundancy and metabolic flexibility of microbial communities in two Mid-Atlantic bays
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect … windows into specific activities catalyzed by microbial communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP … (BER) missions. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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A More Intuitive Phytozome Interface
… Questions about the transition from Phytozome v12 to v13. Why is it necessary to retire Phytozome v12? The codebase … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Webinar: MycoCosm Tutorial
… Do you accept oomycetes to be proposed for genome sequencing, or only “true fungi”? A(nswer): Our focus is on … about myxomycetes (Amoebozoa), would you consider them for sequencing? A: We do have 1 Amoebozoan, > Dicyostelium … produce. 33.  Q: How long does it take usually to get the sequencing results back? A: This depends on multiple factors …
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Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence
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Improving the Cacao Genome and Phytozome
… to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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The Power of One, Amplified
… value to the other commonly used culture-independent sequencing approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of … as high as 80°C (~190°F), yet microbes thrive here. The communities in this extreme environment are often less …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… look back at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out to the future of … this effort would prove invaluable. By the mid-1990s, the sequencing efforts expanded beyond LANL to include resources … support understanding of plants, microbes and environmental communities that have relevance for DOE’s bioenergy and …
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Rex Malmstrom
… activities of specific microbial groups within complex communities.  The Microscale Applications group also carries …
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DAS Tool for Genome Reconstruction from Metagenomes
… particularly from incredibly complex soil microbial communities, is crucial to understanding how these microbes … it to assemblies from both simulated and real microbial communities and examined the bins obtained. The simulated communities were those created for the Critical Assessment …
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Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities
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