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First Monoploid Reference Sequence of Sugarcane
… Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes (they … The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to the gene-rich part of sorghum …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the metabolomic analysis … mass spectrometry-based measurements of primary and secondary metabolites from plants, microorganisms, and … New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar and 150 nonpolar …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as … . The meeting was a hybrid event, with guests joining onsite at the Integrative Genomics Building at Lawrence … to know at the beginning of my career, with my postdoctoral project beginning with her strains,” Wessler explained. “She …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics for … Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA … i.e. in January. She talked about her  Community Science Project proposal with JGI, in which she’s studying a special … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team … a DOE Office of Science user facility at Pacific Northwest National Laboratory. Analyzing the collection of …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… State University campuses for biotechnology education as part of a course-based undergraduate resource … Hess, also the chair of the JGI User Executive Committee, on how that study went from the lab to the classroom. …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science … the data and compute platforms and bioinformatics annotation pipelines that support JGI’s portals, tools, and the … emerging AI-enabled capabilities for science.  Dr. Sneddon is an accomplished leader in data, software, compute, and …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c … us to assess CRAGE’s impact, including how this application could scale,” says Mouncey. The JGI team has already … the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , Yoshikuni and …
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Triggering Morel Fruiting
… in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor Grigoriev from the U.S. … source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … A collaborative team led by Joey Spatafora at Oregon State University, Jason Stajich at the University of … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group at the … Plant Sale. All year, the JGI helps support finding solutions to clean energy and environmental challenges. And many … now IGB-wide ZERO Waste Initiative began its most ambitious project yet: a special recycling program to recycle lab …
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