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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees:                   … $250     Industry: $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular … The JGI and EMSL are U.S. Department of Energy (DOE) Office of …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows … The Science The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating …
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Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science capabilities to support BER's mission of …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … The project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, and …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Congratulations to Jane Grimwood, who has been appointed the … City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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The CC–NB–LRR protein BSR1 from Brachypodium confers resistance to Barley stripe mosaic virus in gramineous plants by recognising TGB1 movement protein
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific contribution? This … to identify their contributions using the Contributor Roles Taxonomy and what sorts of platforms researchers use to …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS … Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for … reaction networks, and also assessing the role of viruses in the soil microbiome. Another accepted proposal in …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … and genome version you’re after.  You can even grab genomes based on which version of Phytozome (e.g., 9, 10, 11, 12) …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written … determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … between fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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