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… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar …

… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & …

… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first genome sequence of a …

… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … level. Scientists might then harness them as molecular tools for research and industry applications. Summary In …

… is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V … and metabolism through reconstruction of microbial genomes from the environment . Nature. 2004. 428, 37–43 …

… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … The Science Since its launch 25 years ago, the  Genomes OnLine Database has matured from six projects on a … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …

… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two … B. distachyon , a relative of the candidate bioenergy crop switchgrass and a JGI Flagship Plant. All three  …

… “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics … more than 13 petabytes of data, accessible through the Genome Portal. “The task of making data more findable and …

… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology …

… and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions allows …

… training in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of … Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the … users with questions on how to partner with the Metagenome Science Program on their research are encouraged to …

… Lead Nikos Kyrpides at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … for identifying viruses and plasmids. Until now, most other tools have focused on identifying only specific plasmids or … Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first version of …