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Daniel Udwary
… of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior to joining the … HPC consultant with NERSC. Dr. Udwary co-hosts JGI’s "Natural Prodcast" podcast, a "fireside chat"-style podcast … (1996) … List available on Google Scholar … Education … Publications …
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Microbial Community Analyses Inform Geochemical Reaction Network Models for Predicting Pathways of Greenhouse Gas Production
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High-quality draft genome sequence of the Thermus amyloliquefaciens type strain YIM 77409T with an incomplete denitrification pathway
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Metagenomic reconstruction of nitrogen and carbon cycling pathways in forest soil: Influence of different hardwood tree species
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Populus MYC2 orchestrates root transcriptional reprogramming of defence pathway to impair Laccaria bicolor ectomycorrhizal development
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Detailed analysis of the D-galactose catabolic pathways in Aspergillus niger reveals complexity at both metabolic and regulatory level
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Marine Microbe Contains Multitudes
But SAR324 can be found throughout the water column, from the warm, well-lit surface, to the blue-lit twilight … carbon on earth; because SAR324 — one of the most abundant organisms in the deep ocean — can fix carbon, SAR324 is able … to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced community genomes …
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JGI@25: The Little Alga That Could
… of both plant and animal cells, it shares nearly 7,000 genes with other organisms (a third of those shared by both … would go on to work on research that identified signaling pathways in Chlamydomonas.   So, Merchant was primed to … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Telomere Organization in the Ligninolytic Basidiomycete Pleurotus ostreatus▿ †
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A Genome-Wide Survey of Switchgrass Genome Structure and Organization
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Multiple whole-genome alignments without a reference organism
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IMG Group
… species specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control …
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