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JGI Portals
Our data platforms are a key resource for the broader scientific … and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal … while also encouraging community engagement and data exchange. … Phytozome is the JGI's Plant Comparative Genomics …
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Corals in Hot Water Get Help From Their Microbes
As waters warm due to climate change, corals are in mortal peril. But corals comprise … When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help them take …
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Finding the Fermenters
Harnessing BER-funded data resources, researchers built an … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … phenotype and genotype of fermentative prokaryotes on IMG … Publication … Datasets … Datasets … Datasets …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have … a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … important for carbon storage, nutrient cycling, and climate change; and biofuels, biomaterials and bioproducts. Learn …
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Methane Makers in Yosemite’s Lakes
… (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. … but varied. They’re a great way to see how climate change affects freshwater ecosystems, and how those …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … virus sequences vary widely. In a previous effort, an international consortium recommended specific … (IMG/M) suite, as well as sequences from the Global Ocean Virome 2.0 dataset based on open ocean samples. CheckV …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal … to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently … team conducted a large-scale comparison, charting several changes caused by the lifestyle change. For example, the …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… to Tanja Woyke, who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium … as Adjunct Scientist at the Bigelow Laboratory for Ocean Sciences and as Associate Adjunct Professor at the …
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Ancient Algae Reveal Secrets of Plant Evolution
… land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … of how plants adapted to terrestrial life paves the way for innovations in sustainable agriculture and clean energy. … ‘MAdLand – Molecular Adaptation to Land: Plant Evolution to Change’ (SPP 2237), and grant 410739858 in the frame of the …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of … Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …
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