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A User-Centered Approach to Accessing JGI Data
… Data that passes through a kingdom portal (assemblies + annotations) For IMG & Mycocosm: Data that is associated … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … metadata criteria. Wilson said that the Data Portal and  Genome Portal will continue to run in parallel for now. …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … hallii (Hall’s panicgrass), by generating two complete genomes from varieties that diverged over a million years … U.S. Department of Energy (DOE) supports research programs for developing methods for converting plant biomass into …
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The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
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Population Level Analysis of Evolved Mutations Underlying Improvements in Plant Hemicellulose and Cellulose Fermentation by Clostridium phytofermentans
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked … newest 5-Year Strategic Plan: Beyond Basepairs — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive …
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Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. … pilot data to assess feasibility of a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data …
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MycoCosm Tutorial
… more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented by Igor Grigoriev, Steven Mondo, …
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Four Researchers Join JGI User Executive Committee
… been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility … State University, Jonathan Eisen of the University of California, Davis, and Michael Köpke of Lanzatech are the latest … technologies, and toward a secure energy portfolio for DOE priorities.  Bik is an associate professor at the …
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User Support Analysis Group
… User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work …
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Alabama Agricultural & Mechanical University Internship Program
… Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in Berkeley, California honing their scientific skills and collaborating with …
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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