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How to Target a Microbial Needle within a Community Haystack
… from complex environmental samples. The Science A team led by researchers at the Max Planck Institute (MPI) for Marine … developed, tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and then … world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of microbes that …
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A Complex Confection Decoded: Sugarcane Reference Genome
… The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar … some duplicates, to sort through in order to form a single cohesive image. An approximately nine billion base … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s …
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Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
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JGI Early Career Researchers Featured in mSystems Special Issue
… beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools … global ecological and environmental processes, especially by modifying host cell metabolism and altering cell fitness. …
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JGI announces 2024 Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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Dan Rokhsar
… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome … the origin, evolution, and diversity of plants and animals by combining computational genome analysis, sequence-based …
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The JGI announces 2024 awardees for our Community Science Program annual call
… calls including our New Investigator and Functional Genomics calls, here on our website . See below for the full …
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Matt Blow
… and Biological Chemistry, Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training … et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. … et al. 2013. Fine Tuning of Craniofacial Morphology by Distant-Acting In Vivo Enhancers. Science 3426157. Blow …
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Help from Citrus’ Bitter, Hardier Cousin
… secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel Rokhsar, published over the last … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI announces 2023 CSP Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… The team found that some of the adaptation strategies used by liverwort are also seen in flowering plants, or … into genes critical for roles including plant growth and cell wall development.  M. polymorpha is also among one of … Pangenomes encompass a plant’s genetic diversity beyond a single reference genome, which is key to understanding its …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… microbial communities — from freshwater estuaries reshaped by dam removal to Antarctica’s photosynthetic mats — to … will target sustainable energy solutions, focusing on lignocellulosic thermophiles and polymer degradation.  “We are … well as our smaller-scale New Investigator and Functional Genomics calls, here on our website.   See below for the …
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