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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission … Yasuo Yoshikuni is the DNA Synthesis Science Program Head at … Click to learn more about the program's areas of focus, major initiatives and more.  … of California, Berkeley Postdoctoral training in Biochemistry, University of Washington …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy feedstock … A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … future. Switchgrass has multiple naturally occurring ploidy levels, called cytotypes, across the species. These are …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from … If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop … crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … that have high productivity across a range of environments is becoming increasingly important for food, fuel and other …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His research … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … offered by the platform are a result of Dr. Louie’s establishment of a strong core foundation of robust mass …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … M., and Yang, X. Metagenomic library and natural product discovery platform. WO2021163637A1 , PCT application …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … List of pubs available on NCBI …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for … Coclet et al., 2023. Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in Biology, Boston University ( magna cum … Serrano et al. 2024.  Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. …
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