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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and … Science Cyclic di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell … 1) complementation of split luciferase (CSL) and, 2) bioluminescence resonance energy transfer (BRET)-based …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … on any proposals previously accepted through JGI’s calls. Nearly 200 Terabases of data are expected to be generated for … Tara Oceans Expeditions that took place between 2009 and 2013, the  Chaetoceros genus has been identified as the most …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a very high … because they’re very productive even in high heat while C3 crops have become less efficient at photosynthesis, a …
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Learning to Look
… Machine learning approach significantly expands inovirus … By the numbers, the new approach detected inoviruses in 3,609 (6 percent) of the 56,868 microbial genomes and 2,249 … component of the prokaryotic virome associated with nearly all bacterial phyla across virtually every ecosystem.” …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … from half of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the … Gardens Are A Community Effort The common gardens began nearly a decade ago with a proposal from UT-Austin’s Tom …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University … bacterial RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in Bioengineering, … products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, Bowen …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … Implementation of the Index of Cell Identity as an R package …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for … to learn more about the program's areas of focus, major initiatives and more.  …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in … the arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized quantitative …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a … Handling Editor, Journal Experimental Botany, 2022 – present … Postdoctoral Award for Research Excellence, 2015 34th Annual Women’s Recognition Award for Science, 2020 NIH …
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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – Arizona State University, Tempe, Chemical …
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