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Steven Wilson
… and supporting applications that span the lifecycle of activities at JGI - proposal submission and review, project and work order creation and management, automated sequence quality control and automation of … group by developing SOPs for instrument maintenance and operation.   Pursuing an interest in coordinating teams and …
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An Integrated Dataset to Understand Ecosystem Interaction
… as the rhizosphere), researchers hope this massive and integrated data set will help identify how different elements of the ecosystem interact and respond to changes in the … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Streamlining Regulon Identification in Bacteria
… in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … technology simplifies this identification process. Multiple factors mediate transcription, including … assay. The second step consists of RNA sequencing of whole transcriptomes, and the third is determining the …
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First Monoploid Reference Sequence of Sugarcane
… Sorghum genome serves as a reference for the highly complex … . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes (they are “polyploid”) and … For the portion of the work conducted by the Joint Genome Institute and the Joint BioEnergy Institute, support …
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The fungus that made itself at home
… plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the … harvested for constructing buildings, the dry rot fungus migrated indoors and across borders, adapting to thrive in … of Oslo scientists and including researchers at the Joint Genome Institute, a DOE Office of Science User Facility, …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could … complex, along with a regulatory accessory protein and multiple metallocofactors. Given the MAR system’s potential … they worked with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … switchgrass transformation pipeline and, in collaboration with industrial partners, generated hundreds of … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … world facilitating the remixing of genes in the next generation of flowering vegetation. In return for their … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 … was a hybrid event, with guests joining onsite at the Integrative Genomics Building at Lawrence Berkeley National … genes has helped pave the way for the conception of a pangenome. Recordings and recaps of all three keynote talks …
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Trent Northen
… Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … of advanced mass spectrometry approaches and model laboratory ecosystems (EcoFABs). … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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Decoding Yellowstone’s Microbial Mats
… began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study …
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