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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is …
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Giant Virus Infection Signatures Are Modulated by Euphotic Zone Depth Strata and Iron Regimes of the Subantarctic Southern Ocean
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The …
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Virus Discoveries that Keep Getting Bigger
… single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in … Nucleocytoviricota , these giant viruses boast larger genomes than many bacteria. Until recently, understanding of … then co-culturing isolated viruses in eukaryotic  microbial hosts. Lately, researchers have used …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … Looking for BBTools? Find it here.  …
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Divergent selection and climate adaptation fuel genomic differentiation between sister species of Sphagnum (peat moss).
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Calculating the Costs of Multiple Switchgrass Gene Copies
… A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … key component in providing genetic variation available for selection to improve biofuel yield through a changing …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … and developmental support from KBase (The Department of Energy Systems Biology Knowledgebase). Myco-Ed is …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … adapt from marine to hypersaline conditions by studying the microbial communities in Antarctic lakes, some of which have … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified …
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the …
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