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Quantitative genetic-by-soil microbiome interactions in a perennial grass affect functional traits
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Functional redundancy and metabolic flexibility of microbial communities in two Mid-Atlantic bays
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to … screen, they can now identify microbes with specific functional characteristics. When they tested the screen … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of … plant carbon decomposition using “function-driven” genomics’. …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … with a host – with 23,000 MAGs. Modeling A New Path for Metagenomics Researchers Building upon these resources, KBase, a …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues … This work was supported by an intramural seed grant (IGSP 2008001) to …
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The JGI announces 2024 awardees for our Community Science Program annual call
… From left to right: [above] Olivia Ahern, Adriana Corales, Hugh Cross, Megan … outcomes.” The annual CSP call is focused on large-scale genomic science projects relevant to the DOE’s Office of … as smaller-scale calls including our New Investigator and Functional Genomics calls, here on our website . See below …
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Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality
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Litter chemistry influences decomposition through activity of specific microbial functional guilds
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Taxonomic and Functional Diversity of a Quercus pyrenaica Willd. Rhizospheric Microbiome in the Mediterranean Mountains
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The distribution, diversity and function of predominant Thermoproteales in high‐temperature environments of Yellowstone National Park
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Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis.
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