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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … analysis of fungal genomes, and Phytozome for comparing plant genomes. Kuo and Grigoriev encourage scientists to …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … organisms we’re finding– at least by looking at their full genomes — are really not like anything that’s been … And so we also sequence a lot of fungi, and we sequence plants. And so we started thinking about if we had a …
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Natural Prodcast Episode 8: Eric Schmidt
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our conversation with Professor Eric Schmidt, from the University … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
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Natural variation in genes potentially involved in plant architecture and adaptation in switchgrass (Panicum virgatum L.)
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Heterospecific Neighbor Plants Impact Root Microbiome Diversity and Molecular Function of Root Fungi
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EnZymClass: Substrate specificity prediction tool of plant acyl-ACP thioesterases based on ensemble learning
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Rhizosphere and detritusphere habitats modulate expression of soil N-cycling genes during plant development
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DAS Tool for Genome Reconstruction from Metagenomes
… an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies … Program (ETOP) , researchers have developed and improved upon a tool that combines existing DNA sequence binning … functions in processes ranging from nutrient cycling to plant health and growth. Developing a scalable computational …
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Evolution of a Fungal Gene Expression Regulator
… 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of … than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually beneficial to … that can move to another location in the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     … estimated 2–6 million species — dwarfing the diversity of plants. To put this evolutionary timescale in perspective, … one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews …
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