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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … virus sequences vary widely. In a previous effort, an international consortium recommended specific … contiguous sequences (contigs) of proviruses flanked on one or both sides by genes from the host organism. With the …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to rapidly growing the economy of … she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited …
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Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis
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Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium
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A Natural Mechanism Can Turbocharge Viral Evolution
… dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using … ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … only for viruses and other microbes , but for scientists. One emerging industry application of DGRs is to use them to …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… (Berkeley Lab), comes in. The JGI is uniquely positioned to enable this kind of science; through its DNA … PI on this project. “I view the program as an excellent platform to build collaborative research initiatives.” Yasuo … enzymes and how they grab hold of different substrates. By analyzing these relationships with machine learning, they …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome … Class using CRAGE Technology Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by … and Analysis of Eukaryotic MAGs from Novel Taxa Christopher Bivins and mentor Satria Kautsar, Comparing BGC …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA … of the 100-page document with over 200 actionable milestones. JGI Director Nigel Mouncey credits JGI Science Program …
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Genomic adaptations of the green alga Dunaliella salina to life under high salinity
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