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Bradyrhizobium sacchari sp. nov., a legume nodulating bacterium isolated from sugarcane roots
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful analysis of microbiome data that has changed our understanding of the microbiome and the microbial …
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Training the Next Generation of Talent
… of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus … a part of the students’ thesis,” she says. “Second, we want our students to gain the opportunity to see what research is … that would allow users to simultaneously run several programs for RNA-Seq assembly to determine which is best for …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Berkeley Lab, screened …
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DOE Metrics
… Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY 2026 Total   … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …
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MGM Workshop at Fisabio Summer School
… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed … professionals of biology, biomedical research, the health sciences and related fields who are interested in learning …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The JGI sequenced the shrub willows through the  Community Science Program , using long-read sequencing to assemble the …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the human language—are well positioned to help enhance our understanding of life’s genomic code, advancing DOE …
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JGI announces 2024 Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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How Filamentous Fungi Sense Food
… networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of … importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … regulatory networks as they responded to available carbon sources, which ranged from simple sugars to plant biomass. …
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Understanding Wildfire Recovery, Starting in Soil
… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the … return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By … New Mexico State University, the Environmental Molecular Sciences Laboratory and the U.S. Department of Energy (DOE) …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on … JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the Arkansas River …
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