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A large sequenced mutant library – valuable reverse genetic resource that covers 98% of sorghum genes
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… took effect in six San Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is … been extended statewide. In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan reflects on … working to address some of the most pressing challenges of our time. For more information, please visit  …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing collaboration is available for licensing. The Science In  Nature Communications , researchers describe a … separating urine from other waste streams and recovering resources that could be used for products such as agricultural …
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MAGI: A Method for Metabolite Annotation and Gene Integration
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Siderophores and secondary metabolites produced by Ganoderma adspersum
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How Filamentous Fungi Sense Food
… networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of … Filamentous fungi are also being used in the biotechnology industry to produce enzymes, proteins, and other … importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are …
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High-Throughput Metagenomic Technologies for Complex Microbial Community Analysis: Open and Closed Formats
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid … How much DNA is needed for “regular” vs the ultra-low input library creation protocols for PacBio? A(nswer):  Regular … PacBio reads (i.e., reads with very low error rate), so our pipeline performs long-reads-only assemblies and not …
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The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes
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Standardized naming of microbiome samples in Genomes OnLine Database.
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