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A novel regulator of the fungal phosphate starvation response revealed by transcriptional profiling and DNA affinity purification sequencing.
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Improved Gene Annotation of the Fungal Wheat Pathogen Zymoseptoria tritici Based on Combined Iso-Seq and RNA-Seq Evidence.
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …
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Emiley Eloe-Fadrosh
… pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging … in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of Medicine … the Metagenome Science Program on their research are encouraged to schedule time with Emiley Eloe-Fadrosh . Click to …
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A Plant Root Atlas for Tracking Developmental Trajectories
… datasets. The work was  recently published in the journal  Developmental Cell and provides a community resource … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader perspective:  …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… with the UC Merced students is a fantastic component of our work,” said Nigel Mouncey, JGI Director. “This year is …
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Cataloging the Microbes that Manage the Health of River Systems
… on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … be the first publicly available, river-focused microbial resource that provides information at multiple scales from …
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DAS Tool for Genome Reconstruction from Metagenomes
… approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity … changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture … with >90% completeness. These results, noted JGI User Programs Deputy Susannah Tringe , suggest that extracting …
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Transcriptome analysis of Brachypodium during fungal pathogen infection reveals both shared and distinct defense responses with wheat
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Acquisition of host-derived carbon in biomass of ectomycorrhizal fungus pisolithus microcarpus is correlated to fungal carbon demand and plant defences.
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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Phylogenetically distinct fungal expansins show different binding preferences towards cellulosic materials and enhance cellulase activity
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