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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly … cracked open the genome of another polar species, the green alga Microglena sp. YARC, which also contains expanded … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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JGI announces 2024 New Investigator portfolio
… a list of researchers whose proposals were accepted for 2024. Harnessing the JGI’s  resources, these researchers will dive into a range of … 2024, for inclusion in the December 2024 review. You can also find more information about the JGI’s various proposal …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… ways. They have the capacity to kill outright, replicating so thoroughly that they lyse the cell — a process called … and archaeal cells — and detected the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then … mat are their viruses? The abundance of a virus relative to its host (inferred through sequence data) can suggest …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… goals.  This year’s internship program was remote in its entirety due to the COVID-19 pandemic. As a result, mentors set up weekly, or in some cases daily, check-ins with their mentors to ensure … Blasius & Guohong “Albert” Wu Edgar Jimenez & Sharon Greenblum and Matt Mingay Frank Gutierrez & Simon Roux …
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The genomic standards consortium: bringing standards to life for microbial ecology
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Busting the Unbreakable Lignin
… eventually yield fuels, and removing lignin in order to do so is a resource-intensive process. Now, a new study shows … as degradation products that accumulated as the fungus did its work.  The UC Santa Barbara team worked with researchers … Research of the U.S. Department of Energy grant DE-SC0020420 (MAO), Institute for Collaborative Biotechnologies …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… feasibility, and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, … data. How can they better demonstrate their capability for being able to carry out the work and utilize the data they … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base … is impacting these marine communities,” said Mock. The greenhouse gas carbon dioxide (CO2), produced from the … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Kjiersten Fagnan
… subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the … distributed data and workflow management. Dr. Fagnan is also a co-PI for the National Microbiome Data Collaborative … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, … and capabilities to enable great science that will help solve energy and environmental challenges.   Usually, plants … engineer at the University of California Santa Barbara. So plants don’t break down without a fight, but it’s an …
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Evolution of a Fungal Gene Expression Regulator
… and functions, but the DNA bases themselves can also be modified. The best-known example of a modified DNA … a methylation of the base cytosine at the 5th position on its carbon ring, or 5mC. In many organisms, 5mC is an … researchers find ways to protect poplar and other crops being considered for bioenergy feedstock development. …
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Nikos Kyrpides
Harrington et al. 2020. A scoutRNA Is Required for Some Type V CRISPR-Cas Systems. Mol Cell . S1097-2765 Schulz … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters … Lawrence Berkeley National Laboratory Outstanding Scientific Achievement Award (2022) ASM’s USFCC/J. Roger …
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