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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative … than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible … by the United States Department of Agriculture National Institute of Food and Agriculture grant 2018-67015-27495, …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have … and published in the journal Science . At the time, the project was co-led by Daniel Rokhsar, head of the JGI’s … new Chlamydomonas genome-related Community Science Program projects of all kinds,” noted Igor Grigoriev, head of the …
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An Addiction Crucial to a Fungus’ Reproduction
… bacteria to regulate key components of its reproductive machinery The Science To better understand how beneficial … are transmitted between host generations, researchers investigated the role that bacteria living within a host … genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As reported in the November 29, 2017 issue of …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of … of scientists. Initiatives like our 1000 Fungal Genomes Project established crucial phylogenetic frameworks spanning … ecological niches from genomic features alone. In one major project analyzing over 1,000 yeast genomes, machine learning …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit white papers to the … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer … researcher who serves as their mentor. By contributing to projects that will help them build skills and tools, they … results not being the most promising. Going into the project, like, I kind of knew that my projects were …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi … DOE Office of Science National User Facilities in a single project. … FTICR-MS analyses were performed under the Facilities Integrating Collaborations for User Science (FICUS) …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in New Orleans and online. Register for the meeting here. … poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types available” …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …
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First Monoploid Reference Sequence of Sugarcane
… and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes … genomes are more difficult to sequence and assemble, in turn limiting the use of modern, genomic breeding in … The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to the gene-rich part of sorghum …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of … better understanding all the organisms that live in our immediate microbiome. The U.S. Department of Energy (DOE) … U.S. Department of Energy Joint Genome Institute (https:// ror.org/04xm1d337), a DOE …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He … to learn more about the program's areas of focus, major initiatives and more.  … and managerial guidance for all aspects of the JGI. This includes responsibilities toward the JGI internal scientific …
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