Search

… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential … of Energy (DOE). By better understanding how poplar responds to its intimate associations with endophytes — a … The team found that, unlike pathogenic or mycorrhizal fungi (mutualist symbionts that induce structural changes in …

… Congratulations to the 2020 Highly Cited Researchers at the JGI! They are … genomes of Dothideomycetes, the largest class of fungi, by lifestyles. Additionally, as part of an … comparison of 135 fungal sequenced genomes to understand how plants and fungi developed symbiotic relationships, and …

… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake … fungi are part of the genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and … of the Asia-Australia region. Overall, pangenome analysis showed significantly more genetic diversity in wild Lentinula …

… Recent study shows eelgrass has been around about 2.5 million years less … the globe. Now, scientists have shed light on both when and how eelgrass adapted and evolved throughout its history. Their research, published in  August 2023 in  Nature … by a PhD scholarship from the China Scholarship Council to L.Y. (number 201704910807), by a fellowship to M.K. in …

… year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set … data sets within groups, such as plants (via Phytozome) or fungi ( MycoCosm ). “We have made a concerted effort to …

… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … Analysis of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will help …

… by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on … mode’, where they do very little.  SIP experiments can show which species actively munch on a specific chemical … this to untangle which microbes ate the compound and how much they ate.  These analyses provide granular insight …

… Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in … they noticed while collecting the samples on canoes just how much change had occurred in this region since the images … added a layer of complexity to the project for figuring out how to bring this project together. The class understood …

… JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the … of Rutgers University is interested in understanding how unicellular red algae (Cyanidiophyceae) have adapted … is interested in understanding which species of mycorrhizal fungi are important for poplar plant health, in part to …

… plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become the … will be forwarded ( where possible ) to their corresponding pages at  https://phytozome-next.jgi.doe.gov . If … at  https://phytozome-next.jgi.doe.gov/jbrowse/index.html How can I access the genome data that was formerly at …

… a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired … part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest piece, JGI user Dr. Tan …

… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 … “Therefore, determining under which form it emerged and how it gave rise to the different pathways we see today is … Borrel and Gribaldo said. “Overall, these results show a striking case of how metabolic diversity can emerge …