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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… & Sharon Greenblum and Matt Mingay Frank Gutierrez & Simon Roux Harrison Ho & Ian Blaby and Ernst Oberortner …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” … Roland Hatzenpichler , Montana State University   Joint Genome Institute Organizers: Frederik Schulz,  New Lineages of Life Lead Emiley Eloe-Fadrosh, Metagenome Program Tanja Woyke, Microbial Program Robert …
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UC Merced Interns Reflect on Their JGI Summer Projects
… the video … Intern: Frank Gutierrez (graduate) Mentor: Simon Roux Click the image to watch the video … Intern: …
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Tanja Woyke
Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research … al. 2022. Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … Nature Biotechnology 35, 676-683. Schulz et al. 2017. Giant viruses with an expanded complement of translation system …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of …
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A Powerful Technique to Study Microbes, Now Easier
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, oil-eating bacterium from a … researchers sequenced and assembled the first complete genome of an uncultured symbiont. The single cell was …
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Doubling Down on Known Protein Families
… of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … majority of these protein families belonged to bacteria and viruses, though 6 million of the sequences evaded … Selvitopi, Antonio Camargo Stephen Nayfach, Ariful Azad, Simon Roux, Lee Call, Natalia N. Ivanova, I Min Che, David …
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10 From JGI on the 2019 Highly Cited Researchers List
… a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more … (GSC), and the International Committee on Taxonomy of Viruses to outline the minimum amount of information for an uncultivated virus genome, including the source, methods of identification of …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … evolution of three traits relevant to DOE interests: photosynthetic transitions, specialized metabolites, and … three groups: cyanophages, bacteriophages, and giant algal viruses.  The approved proposals started October 1, 2020 and …
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An Integrated Dataset to Understand Ecosystem Interaction
… were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic … National Laboratory, dating back to the first complete genome of a poplar tree in 2006. … This research was …
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