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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” … individual genome highlighting the fact that the genetic information in a single reference genome is insufficient. “We … said John Vogel, head of the Plant Functional Genomics program at the JGI and a senior author on the …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … SS. (2021) Widespread polycistronic gene expression in green algae. PNAS  118 (7) e2017714118 Foflonker F and …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone Health) and Leslie Mitchell …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually … the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in …
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A Complex Confection Decoded: Sugarcane Reference Genome
… genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the … sugarcane  genome , the JGI provides foundational genetic information that crop breeders can use to improve sugarcane … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s …
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Introducing New Members of the JGI User Executive Committee
… “you-wren”) of the University of Arizona! They join nine other JGI users already serving on the UEC – go here … cellular phenotypes and genotypes. Pawlowska, who studies fungal-bacterial symbiotic systems, noted that she would … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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JGI Announces 2025 New Investigator Portfolio
Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … and Mar Schmidt; [bottom] Cody Spiegel, James Tan, Emma Timmins-Schiffman, Andressa M. Venturini, Valentin Waschulin, … in the November 2025 review. You can also find more information about the JGI’s  various proposal calls here. …
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Effects of Polar Light Cycle on Microbial Food Web
… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it comes to … there is a strong chemical and salinity gradient — and green sulfur bacteria,  Chlorobium , blooms. The specific …
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User Support Analysis Group
We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging … has released its newest 5-Year Strategic Plan: Innovating Genomics to Serve the Changing Planet (download a copy at … advance biotechnology and biomanufacturing.  As a leader in genomics for bioenergy and environmental solutions, the JGI …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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