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Comparative Genomics Using the Integrated Microbial Genomes and Microbiomes (IMG/M) System: A Deinococcus Use Case
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
To boost crops more efficiently in the future, the evolutionary past may hold key insights. The way that plants … evolved across 90 species. “One unique thing about this work was our focus on all the kingdoms, including animals, … Wisconsin-Madison as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and how healthy they are, a recent data set  outlined … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic … in the human genome. In addition to his appointment at the DOE Joint Genome Institute, Dr. Visel also holds …
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JGI at the AGU Fall Meeting
… submitting successful proposals: Collaborate With a U.S. DOE User Facility: Learn About Available Expertise and … on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … (lightning talk): “Applying Data Standards and Reproducible Workflows To Advance Earth System Science” 11:18am …
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An Automated Tool for Assessing Virus Data Quality
… the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … Biotechnology , a team from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … tool called CheckV that can automatically do both. The work was led by research scientist Stephen Nayfach, the …
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Three Join the JGI User Executive Committee
… (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National … Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of … the Environmental Molecular Sciences Laboratory, another DOE user facility, she will leverage her understanding of …
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Massie S. Ballon
Massie S. Ballon is the Communications and Outreach Manager at the JGI. Prior to this role, she … text-based and multimedia stories that were then shared along with other JGI-relevant content on social media. She is …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed … biology. In addition to this evolutionary focus, his work on plant genomics is targeted towards the development …
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems … head Jeremy Schmutz and  KBase Co-PI Bob Cottingham host a  workshop on DOE Biological and Environmental Research (BER) …
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Introducing New Members of the JGI User Executive Committee
Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full roster of members. … had their own reasons for wishing to serve on the UEC. For microbial ecologist Gilbert at the University of California …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the Arkansas River … … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence … in the physical sciences in the United States, and is working to address some of the most pressing challenges of …
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