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Massie S. Ballon
… Massie S. Ballon is the Communications and Outreach Manager … mission, as well as help cultivate the next generation of genomic research users, partners, and collaborators.  Ms. … translating science, including crafting technical reports, developing educational content, and writing feature …
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ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies
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The future of legume genetic data resources: Challenges, opportunities, and priorities
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Virus-Host Interactions and Genetic Diversity of Antarctic Sea Ice Bacteriophages
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome … where he leads three groups focused on HTP DNA design and assembly, strain engineering and bioinformatic tool … of eukaryotic algae, archaea and bacteria with a view to developing a deeper understanding of sequence-based gene …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific … at the Max Planck Institute (MPI) for Marine Microbiology has developed, tested and deployed a pipeline to first target … biogeochemical cycles remains unexplored and uncultivated. Developing a more targeted genomic approach would allow …
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Development of platforms for functional characterization and production of phenazines using a multi-chassis approach via CRAGE
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Transcriptomic atlas of mushroom development reveals conserved genes behind complex multicellularity in fungi
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Cynipid wasps systematically reprogram host metabolism and restructure cell walls in developing galls
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete … the microbiome of the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  … it’s difficult to link the connections to them from the genetic elements that scientists have found, e.g. plasmids …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving … modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome … in natural ecosystems, and functionally explore viral genetic diversity.  In 2021, he was among those selected by …
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