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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral … development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria did; contemporaries Melainabacteria and Sericytochromatia, members of the same clade …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write …
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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of … separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them archaea. The …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more extreme … it is considered to be a Flagship Plant. By uncovering and characterizing the mechanisms through which sorghum is …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have … of all kinds,” noted Igor Grigoriev, head of the JGI’s Fungal & Algal Program, including work with Olivier Vallon … impact. Her lab has sequenced four additional green algal genomes using Chlamy as a reference for functional …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. … the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The Science … in every corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed that …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … University and Uwe Ohler at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression … with the JGI’s growing efforts in establishing plant and fungal single-cell and spatial transcriptomic technologies, …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our … challenges.   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve spent millions … for anaerobic fungi . Eventually, it’s possible that fungal communities — or enzymes from fungal communities — …
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Learning to Look
Machine learning approach significantly expands inovirus diversity. To … are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not … affecting the microbe’s own eukaryote host. As their small genomes can be easily manipulated through genetic …
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