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NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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Crystal structure of the 4-hydroxybutyryl-CoA synthetase (ADP-forming) from nitrosopumilus maritimus
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Insights into convergent evolution of cosexuality in liverworts from the Marchantia quadrata genome
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Microbial methane production from calcium carbonate at moderately alkaline pH
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Depth-resolved paired metagenomes and metatranscriptomes from the Lake Erie ‘dead zone’
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Biochemical characterization of xyloglucan galactosyltransferases MUR3 and XLT2 from Spirodela polyrhiza
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Crystal structure of 3-hydroxypropionyl-CoA synthetase (ADP-forming) from Nitrosopumilus maritimus
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … Nature Communications , researchers led by Hal Alper at The University of Texas at Austin and Michael Jewett of …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … and viral genomes, as well as genomes sampled all at once from the same environment, called metagenomes. Why? Simon … gauntlet of other cell defenses that could prevent viruses from successfully replicating, even if they managed to enter …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple … Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire … DOE Exascale Computing Project. The award recognized the release of MetaHipMer, an end-to-end genome assembler that …
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? … Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in chemical … Nature Communications , researchers led by Hal Alper at The University of Texas at Austin and Michael Jewett of …
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