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Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has leveraged metagenomics to … ecosystems all over the world, including 3,908 isolate reference DNA viruses and 264,413 computationally identified …

Information, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … said Eugene Koonin, a senior investigator at the NCBI and one of the senior authors on the paper, of the uncovered … tools have uncovered a diversity of viruses that infect not just crops, animals and humans, but also microbes whose …

Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more complete picture … datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published …

… weeks of tricky, laborious lab work to analyze samples from one experiment. Starting a  few years ago, researchers can … proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … it was all about sharing ideas. All breakout sessions, just enough context to get people thinking and tackling some of …

… of scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … with 8 billion metagenome genes from IMG (the study also references data from the JGI’s  Genomes from Earth’s … sequences evaded classification. Researchers also tried to hone in on the function of the genes via 3D modeling, and …

… data modeling, and biological data management. She was one of the co-authors and key developers of the … data management infrastructure of the Integrated Microbial Genomes (IMG) family of systems. Before joining LBNL in … of plasmids from genomes and metagenomes with rich annotations and metadata. Nucleic acids research Jan 2024 Chen …

… were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic … National Laboratory, dating back to the first complete genome of a poplar tree in 2006. … This research was …

Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … relationships are long-term biological interactions between one or more biological organisms. One hallmark of an …