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Forming Scientific Connections and Building Community
This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … In just two months, the students participated in networking workshops, data carpentry hackathons, and also made … Mentors: Yi Zhai & John Vogel Project: Characterization of Brachypodium distachyon root transporters in …
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Tracking the Origins of Methane-Producing Microbes
Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the total … Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Technologies Opportunity Program (ETOP). Following that work, they partnered once more with JGI Microbial Program …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm … plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots … how fungi associate with roots in A. thaliana plants. The work also involved researchers at the French National …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  … (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … environmental bacteria from the Tiny Earth collection. The work builds upon a pilot project to sequence …
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Busting the Unbreakable Lignin
… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … degradation products that accumulated as the fungus did its work.  The UC Santa Barbara team worked with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … mccartyi and  Dehalobacter restrictus,  that work together to break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified …
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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Genome Sequence of Hybrid Vibrio cholerae O1 MJ-1236, B-33, and CIRS101 and Comparative Genomics with V. cholerae▿
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The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants
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