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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, … of Plant-Microbial Interactions “The summer internship has further confirmed by desire to pursue a STEM career, … by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. …
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A Powerful Technique to Study Microbes, Now Easier
Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and …
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing environments … are from narrow swaths of the plant tree of life. One project aims to change that. …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) … (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically … oxygen, dwell in herbivore guts and help them digest their last leafy meal. In their evolutionary history, these fungi … clearly have unexpected chemical potential. … This research project was supported by a grant from Santa Barbara Cottage …
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Yasuo Yoshikuni
Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science … and applications. This program has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also … Engineering … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 … partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial … environments? Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four subgroups, adapted … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and … samples around the world, resulting in a five-fold increase of RNA virus diversity. “The world of viruses around us … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 … they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never … (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State … two students, Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …
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