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Understanding Wildfire Recovery, Starting in Soil
… a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way … from a wildfire that burned at the Colorado-Wyoming border, about a year after the fire. They sampled soil across a …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … a feedstock for biomass-based biofuel production. As seen with many commonly cultivated commercial crops such as … to address long-standing evolutionary ecological hypotheses about how C4 perennial grasses like switchgrass respond to …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… CSP  New Investigator call for proposals.  Tips: Contact us with your questions ([email protected]) Carefully … your proposal idea with JGI staff to clarify key points about JGI’s capabilities, technical feasibility, and … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… now available to the global research community able to not just analyze but also create DNA sequences mimicking an array … sequences based on the principles it learns from the data about genetic structure — carrying with it the potential … understanding of patterns in large complex data, the JGI’s development of GenomeOcean supports the DOE Biological and …
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Refining the Process of Identifying Algae Biotechnology Candidates
… ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they … feedstocks that can thrive in saltwater mitigates concerns about diverting resources such as arable land and fresh …
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“A STEM career is in reach and accessible”
… Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved youth in the Bay Area with personal, academic and professional development experiences that increase participation in …
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A Collaboration to Improve Plant Genome Annotations Across Species
… the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which … specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, …
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JGI Launches Latest Strategic Plan
… sequence to the public data repositories over its now 20-plus-year history. In 2019, the countdown has begun to the … the JGI and KBase in the heart of the Lab’s 200-acre campus—with the big move from leased space in Walnut Creek, Calif. … prospective partners to generate awareness of and clarity about the JGI’s strategic directions,” said Mouncey. “In …
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Len Pennacchio
… Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … at Stanford University where he uncovered the genetic cause of a rare form of human epilepsy and subsequently generated one of the first mouse models for this common neurological disorder. In 1999, …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… and characterized a novel phylum-level lineage of archaea with at least two major subgroups dubbed Marsarchaeota. The … Iron cycling is thought to have played a key role in the development of life on Earth; the iron-oxide microbial mats … (thermophilic) microbes are of interest for their potential use in number of biotechnological applications. Molecular …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa … annotation was developing a high quality node for cacao used for systemic orthology to enable use for both cacao functional biology and breeding.     … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Dehalococcoides mccartyi and  Dehalobacter restrictus,  that work together to break down PCE into the chemical … by Congress in 1980 for Superfund sites which are hazardous waste areas that require cleanup and long-term … that can help bioremediate toxic substances has led to the development of cost-effective environmental cleanup …
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