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Computationally Classifying Fungal Lifestyles
… an algorithm that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest … and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Fishing for Novel Cellulose Degraders
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and unknown. The challenge remains to learn more about what microbes are present in any given …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of … Technologies and Data Science & Informatics. The JGI also sustains a vibrant community of postdoctoral and early career …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
Genomics call for proposals . The proposal call is open year-round, but proposals submitted by July 30 will be … exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis grant during a presentation that …
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JGIota: The Algae Nicknamed ‘Chlamy’
This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii … managed to sequence its genome, and what it has to teach us about other organisms – like plants. [ Editor’s Note: … scientist in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … (VEGA) Symposium , which will take place later this year in Berkeley, Calif. Convening the “viral ecogenomics” …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… switchgrass ( Panicum virgatum ), which has established 10 experimental gardens located in eight states spread … team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … set up these gardens, we have them to study for a number of years. And that’s a real benefit for the research program.” …
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Partners
The JGI leverages its existing partnerships and develops others … expand data functionality. Close partnerships with other user facilities enable the ability to leverage their … through the Facilities Integrating Collaborations for User Science (FICUS) program.     …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have … to address long-standing evolutionary ecological hypotheses about how C4 perennial grasses like switchgrass respond to …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities …
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Project Management Office
The JGI Project Management Office carries out a number of … to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help … with  Science Programs and  Operations enable the JGI to focus on expanding molecular capabilities and functional …
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