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User Executive Committee Charter
The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input … Meeting, as well as input on other aspects of the meeting such as duration, location, and cost; Communicate with the …
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Sequencing Technologies
… sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has allowed the JGI to increase sequencing output while significantly … hand with the Project Management Office to help ensure the JGI’s genomic capabilities are ready and applicable to …
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Yasuo Yoshikuni
… has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … focus includes engineering of non-model yeasts for production of biofuels and renewable chemicals, developing … for building composite materials. Before joining the JGI, Dr. Yoshikuni was co-founder and chief science officer …
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Expanding Virophage Diversity
… with giant viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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MGM Workshop at Fisabio Summer School 2025
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Protocols
Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction …
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Finding the Fermenters
… with little or no oxygen, life had found other ways to produce energy, using a process called fermentation. To better … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metabolism from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the …
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Leadership
… the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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David Goodstein
… at Cornell, IBM, Utah State University, and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to … across multiple genomes.  eLife 11, e78526. Li et al., 2021.  Plant Pan-Genomics Comes of Age . Annual Review of …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … Napier from the Juenger lab and computational biologist Paul Grabowski of HudsonAlpha outline the questions they … and as a feedstock for biomass-based biofuel production. As seen with many commonly cultivated commercial …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … a swath of blueprints to find parts that photosynthesizers share. The end result was a list of genes, termed  The …
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Scientific Advisory Committee
Advisory Committee (SAC) is a board convened by the JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, and … board include providing technical input on large-scale production sequencing, new sequencing technologies, and related …
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