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DAS Tool for Genome Reconstruction from Metagenomes
… the efficacy of this approach would be greatly increased by having the ability to reconstruct complete genomes of … The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … genome-encoded metabolic capabilities and interactions. Supported by JGI’s ETOP, this new tool will now be available …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warmer waters, including the tropics, tend to be dominated by prokaryotes (microorganisms without a defined nucleus). … led by UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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A Collaboration to Improve Plant Genome Annotations Across Species
… Centralized databases with large-scale transcriptome projects such as Expression Atlas and PPRD could help with … difficult. Our Plant Gene Atlas resource addresses that by providing standardized experimental conditions, tissue … Avinash: In the initial planning phase, there were about 10 groups that came together to standardize the experimental …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… Kuhn in his 25th Anniversary presentation. “Those driven by new tools and those driven by new concepts.” Patrinos … genome.  By 2000, a drafted human genome was produced by a joint effort between public and private sectors and it is … and a hardworking team. He highlighted several important projects the JGI has worked on, from the myriad of omics …
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Transcriptional and metabolic stasis define desiccation-induced dormancy in the soil bacterium Arthrobacter sp. AZCC_0090 until water vapor initiates resuscitation
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Polar Phytoplankton Need Zinc to Cope with the Cold
… with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . Byline: Menaka Wilhelm   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Boosting Small Molecule Production in Super “Soup”
… August 26, 2021, in Nature Communications , researchers led by Hal Alper at The University of Texas at Austin and … bioproducts and biofuels . This first report of their work, supported through the Emerging Technologies Opportunity Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… is partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion
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Sequencing Technologies & Products
… offering of sequencing capabilities and products to our users. This includes scaling the technologies and enabling … The JGI provides users access to cutting-edge cell sorting, DNA …
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JGI Scientists Pen Genome Watch Articles
… in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … are sharing their expertise in environmental genomics by writing for the column Genome Watch in  Nature Reviews … As such, JGI is involved in a broad variety of genomics projects that relate to energy and the environment.” she …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… feedstocks of interest to the U.S. Department of Energy (DOE). (Poplar is a Flagship Plant.) To engineer them, … for the next generation. Understanding the mechanisms by which they reproduce can help guide breeding efforts. For … National Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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