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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities … Analysis What effect has your summer internship with the JGI had on your plans to pursue a STEM career?
 Doing the …
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Taking Stock of the Known and Unknown Microbial Space
Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … vastly outnumber the microbes. Advances in sequencing technologies and computational tools have uncovered a … are even less known than DNA viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
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A Complex Confection Decoded: Sugarcane Reference Genome
The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … genome could help scale sustainable sugarcane conversion technologies for  biofuels and other bioproducts. Finally, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Boosting Small Molecule Production in Super “Soup”
… first report of their work, supported through the Emerging Technologies Opportunity Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … paper is the first result of the collaboration with the JGI, where they are partnering with Yasuo Yoshikuni and Ian …
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2025 NeLLi Symposium
Woods Hole Oceanographic Institution Matthew Brown Mississippi State University Anne Dekas Stanford University Yunha … M. Archibald, Dalhousie University Matthew Brown, Mississippi State University Anne Dekas, Stanford University Yunha … 48″ wide or less to ensure 2 posters fitting on the boards. JGI posters are typically printed in the ARCH E size which …
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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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How to Target a Microbial Needle within a Community Haystack
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Development of this protocol was enabled by the JGI’s  Emerging Technologies Opportunity Program . The ETOP helps …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of … lab. My favorite thing is the mentorship provided by JGI. Everyone at JGI is so nice and helpful.”     Mo Kaze, …
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An Automated Tool for Assessing Virus Data Quality
… data quality. The Science Through advances in sequencing technologies and computational approaches, more and more … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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