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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Sequencing Technologies
… sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has … the JGI’s genomic capabilities are ready and applicable to users.  … Sequencing Technologies Lead …
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Green Algae Reveal One mRNA Encodes Many Proteins
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab and the Environmental … “Facilities Integrating Collaborations for User Science” (FICUS) collaborative science initiative between the JGI and … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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Expanding Virophage Diversity
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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A Plant Root Atlas for Tracking Developmental Trajectories
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the paper also aligns with his DOE  Early Career Research Program (ECRP) award, which is also focused on single-cell … and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader perspective:  …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American …
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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, experimentally demonstrated that … Council (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative framework provided by these high … in  Marchantia  and in flowering plant lineages.   With the information about  Marchantia -specific innovations and …
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Scaling Up Existing Skill Sets
… six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … Mentors: Igor Grigoriev and Asaf Salamov, Fungal and Algal Program What effect has your summer internship with the JGI … researchers and help expand or develop more internship programs like the JGI Internship Program during my STEM …
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Effects of Polar Light Cycle on Microbial Food Web
Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Lab). The work was enabled by the JGI’s Community Science Program. For most months each year, Ace Lake is covered in …
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2025 NeLLi Symposium
… full agenda at the bottom of this page. … Check back for information on venue and lodging.  … Once you have completed … Schulz , New Lineages of Life Lead Tanja Woyke , Microbial Program Gitta Szabo , User Project Coordination Rekha Seshadri, Functional …
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