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JGI@25: Stories from Intern Alumni
… a number of notable achievements that showcase our collaborations and capabilities to enable great science that … universities and organizations. From field research and wet lab experiments, to computational modeling and virtual …
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Crops as Tough as World Cup Turf
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Products
… to the  MassIVE repository . Not all products are available for all proposal calls.   Please review the call … shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence …
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Rex Malmstrom
… thus bypassing the need to culture these microbes in the lab. After joining the JGI, he formed the Microscale … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … Boston University ( magna cum laude ) … Serrano et al. 2024.  Spatial co-transcriptomics reveals discrete stages of …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
I hope to gain professional skills, advice skills, wet lab skills and overall connections. Theo Loureaux : I wanted … by being able to talk to people that are working at the lab, my coworkers and I also wanted to know what it’s like to work in the lab. You know, the kind of job that you have to perform, the …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… after her internship. “That level of commitment and collaboration between intern and mentor is what we strive for,” … the factors and mechanics of gene expression in over 400 fungi species. “Fungi are the masters of adaptation,” … that help to explain their work and its impacts at Berkeley Lab and beyond. Last summer, Wint hosted a virtual …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… a DOE Office of Science user facility located at Lawrence Berkeley National Laboratory, have collaborated with global researchers on … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The … … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) conducted by the US Department of …
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JGI Scientists Pen Genome Watch Articles
… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in environmental … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted from 70 full … Jessie Uehling of the University of California, Berkeley is interested in better characterizing the role … intercropping efforts appear to be redistributing water availability. By sequencing the millet rhizosphere and …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… not occurring at that pace, right. And then, hopefully, 3-400 years down the road we’ll have a steady state where we … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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