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… and fungi. We thought this kind of analysis would provide a framework for the evolution of this enzyme family,” said …

… infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the …

… . … Morel Mushrooms on MycoCosm Data Portal …

A., Plott, C., MdS Hossain, J. T., Lovell, J. T.., et al. 2023. JGI plant gene atlas: an updateable transcriptome …

Metagenomic datasets could help map out microbial diversity hotspots … biodiversity. Using publicly available genome sequence data generated over the past three decades, their study … the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all the genomes …

… and combining the information with previously published datasets. The work was  recently published in the journal  … “This represents the largest integration of single-cell datasets in plants and provides a foundation for still … Strategic Plan. The present paper provides a foundational data set that is now available through a new  single-cell …

… an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than single cells or …

… biology, single cell and systems biology, omics, and big data science, machine learning for experimental science, …

… with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data with …

… so now here at the JGI, I work with all of the sequencing data that the JGI produces to try to find and identify … and to do research to get a better understanding of that data. ALISON: Awesome. So tell me why should I even care …

… quality genome assemblies for all three grasses. With these datasets, researchers made a pan-genome containing four  B. … . … Brachypodium distachyon on Phytozome Data Portal …