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Jeremy Schmutz
Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford … the pipelines for directed finishing and co-led the team that finished the DOE human chromosomes 5, 16, and 19. … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … consortium,” she said. Listen to study co-author Dan Udwary talk about genome mining using the GEM catalog in  this …
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Tracing the Evolution of Shiitake Mushrooms
… often source their nutrients — the shii tree, a Japanese relative of the oak. These fungi are part of the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … project of the Spanish Ministry of Science and Innovation (cofinanced by FEDER funds) to F.J.R.-D., S.C., …
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Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022T)
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus … page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop varieties grow best in certain regions. Most plant … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Research Center (GLBRC) , the  Center for Bioenergy Innovation , and the  Joint BioEnergy Institute —have …
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Gamete expression of TALE class HD genes activates the diploid sporophyte program in Marchantia polymorpha
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Genetic mapping and prediction of flowering time and plant height in a maize Stiff Stalk MAGIC population
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Frederik Schulz
… eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … elements with geNomad. Nature Biotechnology . Schulz et al. 2022. Giant virus biology and diversity in the era of …
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The Tale of a Neglected Energy Source: Elevated Hydrogen Exposure Affects both Microbial Diversity and Function in Soil
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User Support Analysis Group
The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse … experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in …
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Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2024)
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