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A novel ecological role of the Firmicutes identified in thermophilic microbial fuel cells
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a … conditions. While scientists around the world were busy sequencing the human genome, an arms race was being waged. … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) … learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples rather than … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools have … datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The … HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, … was possibly driven by genetics, or even temperature. By sequencing the genome, researchers were able to pinpoint …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly … Woyke , Biology & Biochemistry category Some highlights from projects each of these researchers were involved in … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, microorganisms, and environmental samples using … The JGI is not a funding organization. Rather, it makes its sequencing, synthesis, metabolomics and data analyses …
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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a … was just like rediscovering genetics, with the evolution of sequencing technologies and the evolution of … Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are available on MycoCosm …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library Construction … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … different areas, beyond the project’s initial scope. Sequencing and culturing this vast collection of rumen …
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